Package index • riskintroanalysis

Standardize Datasets for ‘Riskintro’ Analysis

reexports apply_mapping mapping_epi_units mapping_entry_points mapping_animal_mobility mapping_emission_risk_factors: Objects exported from other packages

Calculate risks

These functions are to be used for calculations of risks of introduction

calc_animal_mobility_risk(): Calculate animal mobility risk

calc_border_lengths(): Get Shared Borders Between EUs and Bordering Countries

calc_border_risk(): Calculate weighted border risk

calc_emission_risk(): Build the weighted emission risk table

calc_entry_point_risk(): Calculate entry point risk

calc_road_access_risk(): Road access introduction risk analysis

augment_epi_units_with_raster(): Aggregate raster values over polygon areas

Risk score rescaling

rescale_risk_scores(): Scaling range transformation function (re-scaling)

Risk table building and analysis

risk_table(): Initialise table of risks

add_risk(): Add risk to risk table

remove_risk(): Remove risk from risk table

summarise_risk_scores(): Summarise risk score

Risk plotting

plot_entry_points_interactive() plot_animal_mobility_interactive() plot_road_access_interactive() plot_border_risk_interactive() plot_epi_units_interactive() plot_risk_table_interactive() plot_risk() plot_entry_points() plot_animal_mobility() plot_road_access() plot_border_risk() plot_epi_units() plot_risk_table(): Interactive leaflet plotting for entry points

Helper functions

extract_point_risk() extract_flow_risk() extract_raster() extract_border(): Extract analysis subcomponents